|
| Status |
Public on Sep 10, 2013 |
| Title |
Beta cell 5’-shifted isomiRs are candidate regulatory hubs in type 2 diabetes |
| Organism |
Mus musculus |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
We performed deep sequencing of small RNA from mouse insulinoma (MIN6) cells cultured in 25mM glucose. We then developed and implemented an in-house short-read mapping strategy to analyze isomiR diversity.
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| |
|
| Overall design |
Profile of miRNA expression in MIN6 cells cultured in 25mM glucose.
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| |
|
| Contributor(s) |
Baran-Gale J, Sethupathy P |
| Citation(s) |
24039891 |
| Submission date |
Feb 12, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Jeanette Baran-Gale |
| E-mail(s) |
jtbaran@email.unc.edu
|
| Organization name |
University of North Carolina at Chapel Hill
|
| Lab |
Sethupathy & Purvis Labs
|
| Street address |
120 Mason Farm Rd.
|
| City |
Chapel Hill |
| State/province |
NC |
| ZIP/Postal code |
27599 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (3) |
|
| Relations |
| BioProject |
PRJNA189264 |
| SRA |
SRP027317 |
