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Series GSE44415 Query DataSets for GSE44415
Status Public on Aug 01, 2013
Title Expression time-series from Streptomyces coelicolor germination
Organism Streptomyces coelicolor A3(2)
Experiment type Expression profiling by array
Summary Transcriptome time-courses during the S. coelicolor germination were used to reveal processes that underlie the gene expression at the transcriptional level within transition from dormancy to vegetative growth.
 
Overall design Samples from 13 time points at the initial 5.5 h (30 min time intervals) of germination. 2-3 biological (and technical) replicates for each time point. Altogether 37 samples.
 
Contributor(s) Vohradsky J, Strakova E
Citation(s) 24157841, 25539760, 24039809
Submission date Feb 20, 2013
Last update date Aug 23, 2019
Contact name Jiri Vohradsky
E-mail(s) vohr@biomed.cas.cz
Organization name Institute of Microbiology Czech Academy of Sciences
Lab Bioinformatics
Street address Videnska 1083
City Prague
ZIP/Postal code 14220
Country Czech Republic
 
Platforms (1)
GPL16698 Agilent-017905 Oxford Gene Technology S. coelicolor whole genome 4x44K
Samples (37)
GSM1084745 S.coelicolor germination_time dormant_replicate 1
GSM1084746 S.coelicolor germination_time dormant_replicate 2
GSM1084747 S.coelicolor germination_time dormant_replicate 3
Relations
BioProject PRJNA189845

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44415_RAW.tar 484.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
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