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Series GSE44446 Query DataSets for GSE44446
Status Public on Nov 26, 2013
Title Characterization of the DNA methylation patterns in oxaliplatin chemosensitive and chemoresistant human colorectal cancer cell lines
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of LoVo oxaliplatin sensitive (LoVo_S) and LoVo 10 fold oxaliplatin resistant (LoVo_R) cell lines. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in cell lines genomic DNA samples.
 
Overall design Bisulphite converted DNA from the LoVo_S and LoVo_R samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip v1.2
 
Contributor(s) Moutinho C, Esteller M
Citation(s) 24273214
Submission date Feb 20, 2013
Last update date Jan 02, 2015
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (2)
GSM1085591 LoVo oxaliplatin sensitive
GSM1085592 LoV oxaliplatin 10 fold resistant
Relations
BioProject PRJNA190048

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44446_RAW.tar 5.8 Mb (http)(custom) TAR
GSE44446_non-normalized.txt.gz 408.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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