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| Status |
Public on Jun 12, 2015 |
| Title |
DNA methylation analysis of Rhabdoid tumor of the kidney, Clear cell sarcoma of the kidney and Ewing's sarcoma family of tumors |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
Genome wide DNA methylation profiling of Rhabdoid tumor of the kidney, Clear cell sarcoma of the kidney, Ewing's sarcoma family of tumors and non-neoplastic kidney. The Illumina Infinium HumanMethylation 27 BeadChip was used to obtain DNA methylation profiles across approximately 27000 CpGs . Samples included 3 Rhabdoid tumor of the kidney, 3 Clear cell sarcoma of the kidney, 3 Ewing's sarcoma family of tumor and 3 non-neoplastic kidney.
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| Overall design |
Bisulfite converted DNA from the 12 samples were hybridized to the Illumina Infinium HumanMethylation27 Beadchip.
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| Contributor(s) |
Ueno H, Okita H, Kiyokawa N, Nakabayashi K, Hata K |
| Citation(s) |
26098867, 23638012 |
| Submission date |
Mar 04, 2013 |
| Last update date |
Aug 13, 2019 |
| Contact name |
Hitomi Ueno |
| E-mail(s) |
ueno-ht@ncchd.go.jp
|
| Organization name |
National Center for Child Health and Development
|
| Street address |
2-10-1 Okura
|
| City |
Seyagaya-ku |
| ZIP/Postal code |
157-8535 |
| Country |
Japan |
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| Platforms (1) |
| GPL8490 |
Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA192274 |
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