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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 20, 2013 |
| Title |
Genomic landscape of transcriptional and epigenetic dysregulation in a mouse model of early onset Huntington's disease |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by array
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Contributor(s) |
LOPEZ-ATALAYA JP, VALOR LM, BARCO A |
| Citation(s) |
23785159 |
| Submission date |
Mar 05, 2013 |
| Last update date |
Sep 16, 2019 |
| Contact name |
Angel Barco |
| Organization name |
Instituto de Neurociencias (UMH-CSIC)
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| Street address |
Av. Santiago Ramón y Cajal
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| City |
Sant Joan d'Alacant |
| State/province |
Alicante |
| ZIP/Postal code |
03550 |
| Country |
Spain |
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| Platforms (2) |
| GPL6246 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (24)
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| GSM1082895 |
wt (10 weeks), hippocampus, biological rep1 |
| GSM1082896 |
wt (10 weeks), hippocampus, biological rep2 |
| GSM1082897 |
wt (10 weeks), hippocampus, biological rep3 |
| GSM1082898 |
N171-HD82Q (10 weeks), hippocampus, biological rep1 |
| GSM1082899 |
N171-HD82Q (10 weeks), hippocampus, biological rep2 |
| GSM1082900 |
N171-HD82Q (10 weeks), hippocampus, biological rep3 |
| GSM1082901 |
wt (20 weeks), hippocampus, biological rep1 |
| GSM1082902 |
wt (20 weeks), hippocampus, biological rep2 |
| GSM1082903 |
wt (20 weeks), hippocampus, biological rep3 |
| GSM1082904 |
N171-HD82Q (20 weeks), hippocampus, biological rep1 |
| GSM1082905 |
N171-HD82Q (20 weeks), hippocampus, biological rep2 |
| GSM1082906 |
N171-HD82Q (20 weeks), hippocampus, biological rep3 |
| GSM1082907 |
wt (10 weeks), cerebellum, biological rep1 |
| GSM1082908 |
wt (10 weeks), cerebellum, biological rep2 |
| GSM1082909 |
wt (10 weeks), cerebellum, biological rep3 |
| GSM1082910 |
N171-HD82Q (10 weeks), cerebellum, biological rep1 |
| GSM1082911 |
N171-HD82Q (10 weeks), cerebellum, biological rep2 |
| GSM1082912 |
N171-HD82Q (10 weeks), cerebellum, biological rep3 |
| GSM1092643 |
GBD28_AcH3K9,14_ChIPseq |
| GSM1092644 |
GBD29_AcH3K9,14_ChIPseq |
| GSM1092645 |
GBD30_AcH4K12_ChIPseq |
| GSM1092646 |
GBD31_AcH4K12_ChIPseq |
| GSM1092647 |
GBD11_Input_Veh |
| GSM1092648 |
GBD24_IgG_naïve |
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| This SuperSeries is composed of the following SubSeries: |
| GSE44306 |
Gene expression profile of N171-HD82Q hippocampus and cerebellum. |
| GSE44854 |
Histone deacetylation-dependent and -independent transcriptional dysregulation in early-onset polyglutamine disease |
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| Relations |
| BioProject |
PRJNA192421 |
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