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Series GSE45118 Query DataSets for GSE45118
Status Public on Sep 02, 2014
Title mRNA Expression Comparison Between Igfbp7-null and wild type mice at Lactation Day 3
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Insulin like growth factor binding protein 7, Igfbp7, is a secreted protein that in addition to modulating insulin and insulin-like growth factor signaling, it acts as a tumor suppressor gene in breast and other cancers.
To elucidate the role of Igfbp7 in regulating the proliferation and differentiation of mammary epithelial cells, we examined the growth and differentiation of mammary gland through different stages of its development in Igfbp7-null mice.
Using transcriptome profiling in addition to functional assays we demonstrate that loss of Igfbp7 leads to diminished luminal cell differentiation and expansion of the luminal progenitors.
These studies identify the endocrine factor Igfbp7, as a key regulator of luminal progenitor functions in the mammary gland.
 
Overall design Mammary gland mRNA profiles of lactation day 3 wild type (WT) and Igfbp7-/- (KO) mice were generated by deep sequencing using SOLiD5500xl
 
Contributor(s) Amemiya Y, Bacopulos S, Chatterjee S, Raouf A, Seth A
Citation(s) 24505323
Submission date Mar 12, 2013
Last update date May 15, 2019
Contact name Yutaka Amemiya
E-mail(s) yamemiya@sri.utoronto.ca
Organization name Sunnybrook Research Institute
Lab Genomics Core Facility
Street address 2075 Bayview Ave.
City Toronto
State/province ON
ZIP/Postal code M4N3M5
Country Canada
 
Platforms (1)
GPL15907 AB 5500xl Genetic Analyzer (Mus musculus)
Samples (2)
GSM1097464 IGFBP7_LD3_WT
GSM1097465 IGFBP7_LD3_KO
Relations
SRA SRP019193
BioProject PRJNA193345

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45118_RAW.tar 78.0 Mb (http)(custom) TAR (of TXT, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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