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| Status |
Public on Jun 30, 2015 |
| Title |
Molecular responses in skeletal muscles following spinal cord injury and the effect of locomotor training |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
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| Summary |
Spinal cord injury (SCI) is one of the most disabling health problems facing adults today. Locomotor training has been shown to induce substantial recovery in muscle size and muscle function in both transected and contusion injury animal models of SCI.
The overall objective of this study is to implement genome wide expression profiling of skeletal muscle to define the molecular pathways associated with muscle remodeling after SCI and during locomotor training (TM).
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| Overall design |
We profiled rat soleus of total 36 samples including controls; 3, 8 and 14 days after SCI; 8 and 14 days after SCI with locomotor treadmill training (TM).
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| Citation(s) |
26380273 |
| Submission date |
Mar 27, 2013 |
| Last update date |
Jul 31, 2017 |
| Contact name |
Yi-Wen Chen |
| E-mail(s) |
ychen@cnmc.org
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| Organization name |
Children's Research Institute
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| Department |
Genetic Medicine Research
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| Street address |
111 Michigan Ave NW
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| City |
Washington |
| State/province |
DC |
| ZIP/Postal code |
20010 |
| Country |
USA |
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| Platforms (1) |
| GPL1355 |
[Rat230_2] Affymetrix Rat Genome 230 2.0 Array |
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| Samples (36)
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| GSM1109083 |
rat Control, rep4 |
| GSM1109084 |
rat Control, rep5 |
| GSM1109085 |
rat Control, rep6 |
| GSM1109086 |
rat SCI3d, rep1 |
| GSM1109087 |
rat SCI3d, rep2 |
| GSM1109088 |
rat SCI3d, rep3 |
| GSM1109089 |
rat SCI3d, rep4 |
| GSM1109090 |
rat SCI3d, rep5 |
| GSM1109091 |
rat SCI3d, rep6 |
| GSM1109092 |
rat SCI8d, rep1 |
| GSM1109093 |
rat SCI8d, rep2 |
| GSM1109094 |
rat SCI8d, rep3 |
| GSM1109095 |
rat SCI8d, rep4 |
| GSM1109096 |
rat SCI8d, rep5 |
| GSM1109097 |
rat SCI8d, rep6 |
| GSM1109098 |
rat SCI8d, TM, rep1 |
| GSM1109099 |
rat SCI8d, TM, rep2 |
| GSM1109100 |
rat SCI8d, TM, rep3 |
| GSM1109101 |
rat SCI8d, TM, rep4 |
| GSM1109102 |
rat SCI8d, TM, rep5 |
| GSM1109103 |
rat SCI8d, TM, rep6 |
| GSM1109104 |
rat SCI14d, rep1 |
| GSM1109105 |
rat SCI14d, rep2 |
| GSM1109106 |
rat SCI14d, rep3 |
| GSM1109107 |
rat SCI14d, rep4 |
| GSM1109108 |
rat SCI14d, rep5 |
| GSM1109109 |
rat SCI14d, rep6 |
| GSM1109110 |
rat SCI14d, TM, rep1 |
| GSM1109111 |
rat SCI14d, TM, rep2 |
| GSM1109112 |
rat SCI14d, TM, rep3 |
| GSM1109113 |
rat SCI14d, TM, rep4 |
| GSM1109114 |
rat SCI14d, TM, rep5 |
| GSM1109115 |
rat SCI14d, TM, rep6 |
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| Relations |
| BioProject |
PRJNA194563 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE45550_RAW.tar |
97.5 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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