NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE46047 Query DataSets for GSE46047
Status Public on Apr 17, 2013
Title C/EBP Maintains Chromatin Accessibility in Liver and Facilitates Glucocorticoid Receptor Recruitment to Steroid Response Elements
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary DNase-seq and ChIP-seq determine that C/EBP maintains chromatin accessibility in liver and facilitates glucocorticoid receptor recruitment to steroid response elements
 
Overall design DNase-seq and ChIP-seq (GR, C/EBPb and RNAPII) in intact liver from adrenalectomized mice injected with dex (1h)
 
Contributor(s) Grontved L, Hager G, Baek S
Citation(s) 23665916
Submission date Apr 15, 2013
Last update date May 15, 2019
Contact name Songjoon Baek
Organization name NCI / NIH
Department CCR
Lab LRBGE
Street address 41 Library Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (32)
GSM1122512 Adx_liver_dex_GR_ChIP_rep1
GSM1122513 Adx_liver_veh_GR_ChIP_rep1
GSM1122514 Adx_liver_veh_GR_ChIP_rep2
Relations
SRA SRP021075
BioProject PRJNA197300

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46047_CEBPb_peaks_dex_mouse_liver_mm9.txt.gz 265.7 Kb (ftp)(http) TXT
GSE46047_CEBPb_peaks_veh_mouse_liver_mm9.txt.gz 238.8 Kb (ftp)(http) TXT
GSE46047_DHS_dex_mouse_liver_mm9.txt.gz 668.5 Kb (ftp)(http) TXT
GSE46047_DHS_veh_mouse_liver_mm9.txt.gz 599.7 Kb (ftp)(http) TXT
GSE46047_GR_peaks_mouse_liver_mm9.txt.gz 123.0 Kb (ftp)(http) TXT
GSE46047_RNAPII_Genes_regulated_by_Dex.xlsx.gz 42.5 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap