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Series GSE46407 Query DataSets for GSE46407
Status Public on Dec 31, 2013
Title Effect of LOX-PP on the gene expression profile of the A673 cell line (Ewing sarcoma)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this study we show that lysyl oxidase (LOX), an enzyme involved in maintaining structural integrity of the extracellular matrix, is expressed at low levels in Ewing sarcoma cells and primary tumors and is downregulated by the EWS/FLI1 oncoprotein characteristic of these tumors. Using a doxycycline inducible system to restore LOX expression in an Ewing sarcoma derived cell line, we show that LOX displays tumor suppressor activities. Interestingly, we show that the tumor suppressor activity resides in the propeptide domain of LOX (LOX-PP), an N-terminal domain produced by proteolytic cleavage during the physiological processing of LOX. Finally, we show that LOX-PP inhibits ERK/MAPK signalling pathway, and that many pathways involved in cell cycle progression were significant deregulated by LOX-PP, providing a mechanistic explanation to the cell proliferation inhibition observed upon LOX-PP expression. In summary, our observations indicate that deregulation of the LOX gene participates in Ewing sarcoma development and identify LOX-PP as a new therapeutic target for one of the most aggressive paediatric malignancies. These findings suggest that therapeutic strategies based in the administration of LOX propeptide or functional analogues could be useful in the treatment of this devastating paediatric cancer.
 
Overall design A673 cells derived from Ewing sarcoma were genetically enginereed to express LOX-PP upon doxycycline stimulation (72 hours). Three independent experiments from control cells and three independent experiments from A673 cells expressing LOX-PP were done. Gene expression profile in A673 cells expressing LOX-PP vs control cells were compared.
 
Contributor(s) Agra N, Cidre F, Alonso J
Citation(s) 23750284
Submission date Apr 26, 2013
Last update date Feb 10, 2020
Contact name Javier Alonso
E-mail(s) fjalonso@isciii.es
Phone 34-91-8223217
Organization name INSTITUTO DE SALUD CARLOS III - IIER
Department AREA DE GENÉTICA HUMANA
Lab UNIDAD DE TUMORES SOLIDOS INFANTILES
Street address CTRA. MAJADAHONDA-POZUELO KM 2
City MAJADAHONDA
State/province MADRID
ZIP/Postal code 28220
Country Spain
 
Platforms (1)
GPL17077 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
Samples (6)
GSM1129827 A673/TR/empty_replicate_1
GSM1129828 A673/TR/empty_replicate_2
GSM1129829 A673/TR/empy_replicate_3
Relations
BioProject PRJNA200286

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46407_RAW.tar 19.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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