NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE46451 Query DataSets for GSE46451
Status Public on Dec 12, 2013
Title Effects of Inflammation and 5-ASA on ex vivo cultured ulcerative colitis biopsies
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To seek effects of inflammatory status and 5-aminosalicylic acid (5-ASA, mesalazine) exposure ex vivo on mRNA levels within rectal mucosal biopsies from patients with ulcerative colitis.
 
Overall design A total of 12 biopsies were analysed, 3 biological replicates in each of 4 categories (inflamed with or without 5-ASA, non-inflamed with or without 5-ASA).
 
Contributor(s) MacFie TS, Boitsova T, Nijhuis A, Mein CA, Nuamah RA, Silver AR, Lindsay JO
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 29, 2013
Last update date Aug 13, 2018
Contact name Charles Mein
E-mail(s) c.a.mein@qmul.ac.uk
Organization name Queen Mary University
Department Genome Centre
Street address Charterhouse Square
City London
ZIP/Postal code EC1M 6BQ
Country United Kingdom
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (12)
GSM1130492 inflamed_no drug_rep1
GSM1130493 inflamed_no drug_rep2
GSM1130494 inflamed_no drug_rep3
Relations
BioProject PRJNA200560

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46451_RAW.tar 26.2 Mb (http)(custom) TAR
GSE46451_non-normalized_data.txt.gz 6.6 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap