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| Status |
Public on May 07, 2013 |
| Title |
All Differentially Expressed miRNA in burned murine skin tissue compared to normal skin tissue |
| Platform organism |
synthetic construct |
| Sample organism |
Mus musculus |
| Experiment type |
Non-coding RNA profiling by array
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| Summary |
Interactions between stromal cell-derived factor-1α (SDF-1α) and its cognate receptor CXCR4 are crucial for the recruitment of mesenchymal stem cells (MSCs) from bone marrow (BM) reservoirs to damaged tissues for repair during alarm situations. MicroRNAs are differentially expressed in stem cell niches, suggesting a specialized role in stem cell regulation. Here, we gain insight into the molecular mechanisms involved in regulating SDF-1α.
Individualized outcome prediction classifiers were successfully constructed through expression profiling of microRNAs (in all organisms as annotated in Sanger miRBase Release 11.0 (http://microrna.sanger.ac.uk))in one burned murine skin tissue compared to normal skin tissue,which had 57 upregulated microRNAs and 28 down-regulated microRNAs
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| Overall design |
In the study presented here, a consecutively operated, well-defined cohort of 2 cases, was used to acquire expression profiles of microRNAs(in all organisms as annotated in Sanger miRBase Release 11.0 (http://microrna.sanger.ac.uk)), leading to the successful construction of supervised .
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| Contributor(s) |
Lv MH, Liang GP |
| Citation(s) |
23894385 |
| Submission date |
May 06, 2013 |
| Last update date |
May 10, 2016 |
| Contact name |
gan wu |
| E-mail(s) |
ganwu82@163.com
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| Phone |
18930963499
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| Fax |
021-37773499
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| Organization name |
yingbiotech
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| Street address |
nm 928 wenxiang road
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| City |
shanghai |
| ZIP/Postal code |
201620 |
| Country |
China |
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| Platforms (1) |
| GPL17107 |
Exiqon miRCURY LNA™ microRNA Array - hsa, mmu & rno |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA201415 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE46660_RAW.tar |
1.0 Mb |
(http)(custom) |
TAR (of GPR) |
| GSE46660_normalized_matrix.txt.gz |
19.2 Kb |
(ftp)(http) |
TXT |
| Processed data are available on Series record |
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