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Series GSE46754 Query DataSets for GSE46754
Status Public on May 09, 2013
Title Gene expression analysis of omental and mesenteric adipose tissue in Crohn's disease and ulcerative colitis
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Our hypothesis is that in IBD patients intestinal bacteria translocation into the intra-abdominal fat depots affects adipocyte morphology and gene expression. The study aimed to study adipocyte gene expression of omental (OM) and mesenteric (MES) adipose tissue of ulcerative colitis (UC) and crohn's disease (CD).
 
Overall design Total RNA was extracted from isolated adipocytes from omental and mesenteric adipose tissue of CD and UC patients. Microarray experiments were performed in duplicates of 4 different pools of RNAs extracted from adipocytes isolated from OM and MES of UC patients (n=5) and CD patients (n=5) respectively.
 
Contributor(s) Zulian A
Citation(s) 24205244
Submission date May 08, 2013
Last update date Oct 24, 2019
Contact name Zulian Alessandra
E-mail(s) a.zulian@auxologico.it
Organization name istituto auxologico italiano
Street address via zucchi 18
City cusano milanino
State/province milano
ZIP/Postal code 20095
Country Italy
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (8)
GSM1138177 CD OM_1 replicate
GSM1138178 CD OM_2 replicate
GSM1138179 CD MES_1 replicate
Relations
BioProject PRJNA202246

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46754_RAW.tar 6.2 Mb (http)(custom) TAR
GSE46754_non-normalized.txt.gz 4.7 Mb (ftp)(http) TXT
Processed data included within Sample table

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