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Series GSE46856 Query DataSets for GSE46856
Status Public on Jan 01, 2014
Title PLK1 signaling coopereates with estrogen receptor-dependent gene transcription.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of MCF7 breast cancer cells treated with estadiol for 6 h in presence or absence of the specific PLK1 inhibitor BI2536. Together with CHIP and global phosphoproteome data, the results demonstrate a key role of PLK1 in the estrogen receptor-mediated gene response.
 
Overall design Hormone-deprived MCF7 cells were pretreated with BI2536 or vehicle (DMSO) followed by induction with estradiol (E2) or vehicle (ethanol). RNA of each condition was analysed in triplicate on an Agilent Human genome 4x44k v2 microarray [note: MCF7_DMSO_E2_rep3 sample was a clear technical outlier (poor hybridization), and was therefore excluded from the further analysis/this record].
 
Contributor(s) Wierer M, Beato M
Citation(s) 23770244
Submission date May 13, 2013
Last update date Jan 09, 2018
Contact name Michael Wierer
E-mail(s) mwierer@gmail.com
Organization name Center for Genomic Regulation (CRG)
Street address c/ Dr. Aiguader 88
City Barcelona
ZIP/Postal code 08003
Country Spain
 
Platforms (1)
GPL13497 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
Samples (11)
GSM1139233 MCF7_DMSO_ETOH_rep1
GSM1139234 MCF7_DMSO_ETOH_rep2
GSM1139235 MCF7_DMSO_ETOH_rep3
Relations
BioProject PRJNA202861

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46856_RAW.tar 98.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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