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Series GSE47140 Query DataSets for GSE47140
Status Public on May 22, 2013
Title Adenovirus E1A oncogene induces re-replication of cellular DNA and alters DNA replication dynamics
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Human adenovirus type 5 oncogene E1A was shown to induce massive re-replication of cellular DNA in late S phase. Using DNA combing analysis, it was shown that DNA replication dynamics including replicon length, fork velocity and inter-origin distance were dramatically altered in E1A expressing cells as compared to that of normal serum stimulated cells. It was also shown that c-Myc that is induced in E1A expressing cells is essential for the efficient entry of E1A expressing cells into S phase.
 
Overall design Serum starved cells were infected with an adenovirus expressing only the transforming E1A protein, and with Adbeta-galactosidase (control) were analyzed by flow cytomery. DNA prepared from such cells were analyzed by DNA combing analysis and data obtained were examined statistically. Requirement of Myc in E1A induced S phase entry was also examined by using antisense Myc vector.
 
Contributor(s) Singhal G, Leo E, Krushna S, Setty G, Pommier Y, Thimmapaya B
Citation(s) 23740993
Submission date May 21, 2013
Last update date Aug 13, 2018
Contact name Ghata Singhal
Phone 312-503-5176
Organization name Northwestern University
Department Microbiology-Immunology
Street address 303 E Chicago Avenue
City Chicago
State/province Illinois
ZIP/Postal code 60611
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (4)
GSM1145614 Quiescent MCF10A cells infected with Adb-gal B1
GSM1145615 Quiescent MCF10A cells infected with Adb-gal B2
GSM1145616 Quiescent MCF10A cells infected with AdE1A virus E1
Relations
BioProject PRJNA204400

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47140_RAW.tar 26.2 Mb (http)(custom) TAR
GSE47140_non-normalized.txt.gz 947.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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