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Series GSE47678 Query DataSets for GSE47678
Status Public on Aug 13, 2013
Title Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 23938295
Submission date Jun 05, 2013
Last update date May 15, 2019
Contact name Iouri Chepelev
E-mail(s) ichepelev@gmail.com
Organization name US Department of Veterans Affairs Medical Center
Street address 3200 Vine St
City Cincinnati
State/province OH
ZIP/Postal code 45220
Country USA
 
Platforms (2)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (22)
GSM1151048 IMR90_GA2064_RNAseq
GSM1151049 IMR90_Aza_GA2065_RNAseq
GSM1151050 HCT116_GA2066_RNAseq
This SuperSeries is composed of the following SubSeries:
GSE47488 Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition [RNA-Seq]
GSE47677 Intragenic DNA methylation modulates alternative splicing by recruiting MeCP2 to promote exon recognition [ChIP-Seq]
Relations
BioProject PRJNA207096

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47678_RAW.tar 3.0 Gb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp

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