|
| Status |
Public on Dec 05, 2013 |
| Title |
Murine E9.5 embryo PSM and newly formed somites: Paraxis-/- vs WT |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcriptional profiling of E9.5 mouse embryo tissue from the presomitic mesoderm (PSM) and somites I-IV. Tissue from embryos lacking a functional Paraxis gene (Paraxis-/-) was compared to identical tissue from E9.5 Wild Type embryos. The goal was to identify genes that had become deregulated in the absence of the transcription factor, Paraxis.
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| |
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| Overall design |
Two-condition experiment: WT vs Paraxis-/- tissue. Biological replicates: 3 pools of 5 WT samples, 3 pools of 5 Paraxis-/- samples. Technical replicates: 3 dye swaps.
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| |
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| Contributor(s) |
Rowton MJ, Rawls A |
| Citation(s) |
24038871 |
| Submission date |
Jun 13, 2013 |
| Last update date |
May 10, 2018 |
| Contact name |
Megan Rowton |
| E-mail(s) |
mrowton@asu.edu
|
| Organization name |
Arizona State University
|
| Department |
School of Life Sciences
|
| Lab |
Dr. Alan Rawls
|
| Street address |
PO Box 874601
|
| City |
Tempe |
| State/province |
AZ |
| ZIP/Postal code |
85287–4601 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL4134 |
Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) |
|
| Samples (6)
|
| GSM1162191 |
Control WT sample A vs Paraxis-/- sample A |
| GSM1162192 |
Dye swap: Paraxis-/- sample A vs control WT sample A |
| GSM1162193 |
Control WT sample B vs Paraxis-/- sample C |
| GSM1162194 |
Dye swap: Paraxis-/- sample C vs control WT sample B |
| GSM1162195 |
Control WT sample C vs Paraxis-/- sample B |
| GSM1162196 |
Dye swap: Paraxis-/- sample B vs control WT sample C |
|
| Relations |
| BioProject |
PRJNA208291 |
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