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Series GSE48072 Query DataSets for GSE48072
Status Public on Jun 19, 2013
Title RNA analysis in Finnish Schizophrenia Families
Organism Homo sapiens
Experiment type Expression profiling by array
Summary 18 Families (66 individuals) from an established cohort for schizophrenia in Finland provided RNA for analysis of genome-wide gene expression levels in blood lymphocytes. These have been collected for the analysis of genetic risk variants for mental illness that are present within these families, under the hypothesis that genetic variants will lead to changes in the biological functioning that represent the mechanisms altered in the etiology of major mental illness, with gene expression providining a means to observe such alterations.
 
Overall design Total RNA was extracted from fresh blood samples donated by 66 individuals from 18 families ascertained for schizophrenia. Gene expression was measured using 6 chips, with two individuals (samples 2 and 8) replicated across chips. The non-normalized matrix contains the complete data, including replicates.
 
Contributor(s) Hennah W, Suvisaari J, Tomppo L, Torniainen M, Paunio T, Ortega-Alonso A, Lönnqvist J
Citation(s) 23912948
Submission date Jun 18, 2013
Last update date Aug 13, 2018
Contact name William Hennah
E-mail(s) william.hennah@helsinki.fi
Organization name Institute for Molecular Medicine Finland, FIMM
Street address FIMM, PO Box 20
City Helsinki
ZIP/Postal code FI-00014
Country Finland
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (66)
GSM1167259 blood-schizophrenia case sample 1
GSM1167260 blood-schizophrenia case sample 2
GSM1167261 blood-schizophrenia control sample 3
Relations
BioProject PRJNA208849

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48072_RAW.tar 26.2 Mb (http)(custom) TAR
GSE48072_non-normalized.txt.gz 11.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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