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| Status |
Public on Jun 19, 2014 |
| Title |
The transcription factor GATA6 allows self-renewal of colon adenoma stem cells by repressing BMP gene expression. |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
Aberrant activation of WNT signaling and loss of BMP signals represent the two main alterations leading to the initiation of colorectal cancer (CRC). Here we screen for genes required for maintaining the tumor stem cell phenotype and identify the zinc-finger transcription factor GATA6 as key regulator of the WNT and BMP pathways in CRC. GATA6 directly drives the expression of LGR5 in adenoma stem cells while it restricts BMP signaling to differentiated tumor cells. Genetic deletion of Gata6 in mouse colon adenomas increases the levels of BMP factors, which signal to block self-renewal of tumor stem cells. In human tumors, GATA6 represses BMP4 gene expression through binding to a regulatory region that has been previously linked to increased susceptibility to develop CRC. Thus, GATA6 creates a permissive environment for tumor stem cell expansion by controlling the major signaling pathways that influence CRC initiation.
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| Overall design |
Total RNA from biological replicates of VillinCreERT2Gata6+/+Apcfl/fl and VillinCreERT2Gata6fl/flApcfl/fl colon adenoma tumor organoids grown for one week in control media (see growth protocol).Total RNA was extracted using the TRIzol® Plus RNA Purification Kit (Life Technologies).
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| Contributor(s) |
Whissell G |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Aug 01, 2013 |
| Last update date |
Aug 06, 2018 |
| Contact name |
Evarist Planet Letschert |
| E-mail(s) |
evarist.planet@irbbarcelona.org
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| Organization name |
IRB Barcelona
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| Department |
Biostatistics
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| Street address |
C/ Baldiri Reixac 10
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| City |
Barcelona |
| State/province |
Spain |
| ZIP/Postal code |
08028 |
| Country |
Spain |
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| Platforms (1) |
| GPL11180 |
[HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA214318 |
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