|
| Status |
Public on Nov 18, 2013 |
| Title |
Genome-wide maps of Runx3 bound regions in splenic IL-2-activated CD8+ T cells |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
ChIP-seq was conducted on isolated splenic WT CD8+ T cells, TCR-activated and cultured with IL-2 using anti-Runx3 antibodies (Ab), anti-H3K4me1 Ab and non-immune serum (NIS) as control.
|
| |
|
| Overall design |
Two biological Runx3 and two NIS IP repeats from TCR-activated and IL-2 cultured splenic CD8+ T cells isolated by positive selection on anti-CD8 magnetic beads.
|
| |
|
| Contributor(s) |
Lotem J, Leshkowitz D, Groner Y |
| Citation(s) |
24236182 |
| Submission date |
Aug 22, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Joseph Lotem |
| E-mail(s) |
joseph.lotem@weizmann.ac.il
|
| Phone |
972-8-934-2342
|
| Organization name |
Weizmann institute of science
|
| Department |
Molecular genetics
|
| Street address |
P.O.B 26
|
| City |
Rehovot |
| ZIP/Postal code |
76100 |
| Country |
Israel |
| |
|
| Platforms (1) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
|
| Samples (5)
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| This SubSeries is part of SuperSeries: |
| GSE50131 |
The transcription program of Runx3 in natural killer cells and CD8+ T cells |
|
| Relations |
| BioProject |
PRJNA216113 |
| SRA |
SRP029169 |
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