|
| Status |
Public on Aug 30, 2013 |
| Title |
Mining gene expression data for low doses of radiation and pollutants (dioxin, toluene, formaldehyde) |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Expression profiles of Drosophila melanogaster in response to ionizing radiation, formaldehyde, toluene, and 2,3,7,8-tetrachlorodibenzo-p-dioxin.
|
| |
|
| Overall design |
RNA-seq analysis on 25,415 transcripts to measure the change in gene expression in males and females separately. An analysis of the genes unique to each treatment yielded a list of genes as a gene expression signature. In the case of radiation exposure, both sexes exhibited a reproducible increase in their expression of the transcription factors sugarbabe and tramtrack.
|
| |
|
| Contributor(s) |
Moskalev AA, Kudryavtseva AV |
| Citation(s) |
24475070 |
| Submission date |
Aug 27, 2013 |
| Last update date |
Feb 04, 2020 |
| Contact name |
Anna Kudravsteva |
| Organization name |
EIMB RAS
|
| Street address |
Vavilova, 32
|
| City |
Moscow |
| ZIP/Postal code |
119991 |
| Country |
Russia |
| |
|
| Platforms (1) |
| GPL13304 |
Illumina HiSeq 2000 (Drosophila melanogaster) |
|
| Samples (10)
|
|
| Relations |
| BioProject |
PRJNA217367 |
| SRA |
SRP029274 |
Less...
More...