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Series GSE50645 Query DataSets for GSE50645
Status Public on Jan 01, 2015
Title Gene expression profiles upon Meis1 knockout in Hoxa9/Meis1-induced AML
Organism Mus musculus
Experiment type Expression profiling by array
Summary Meis1 is found cooperatively activated with Hoxa7/a9 in AML, and it indeed promotes leukemogenic activities of Hoxa9. It is important to identify downstream target genes of Meis1 to understand its cooperative activity with Hoxa9 in leukemogenesis.
We used microarrays to detail the global programme of gene expression upon Meis1 knockout.
 
Overall design Murine primary bone marrow cells of the Rosa26-Cre-ERT2 knock-in mouse were transformed by retroviral transduction of Hoxa9 and floxed Meis1. The immortalized bone marrow cells were treated with 2 μM of 4-hydroxytamoxifen to delete Meis1 cDNA. Gene expression profiles were compared between the original Hoxa9/Meis1-expressing cells and Meis1 deleted (Hoxa9 only) cells.
 
Contributor(s) Yokoyama T, Nakamura T
Citation(s) 27018596
Submission date Sep 06, 2013
Last update date Aug 06, 2018
Contact name Takuro Nakamura
E-mail(s) takuro-ind@umin.net
Phone 81-3-3570-0462
Organization name Japanese Foundation for Cancer Research
Department The Cancer Institute
Lab Carcinogenesis
Street address 3-8-31 Ariake, Koto-ku
City Tokyo
ZIP/Postal code 135-8550
Country Japan
 
Platforms (1)
GPL11180 [HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate
Samples (8)
GSM1225245 Hoxa9 1
GSM1225246 Hoxa9 2
GSM1225247 Hoxa9 3
Relations
BioProject PRJNA218195

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE50645_RAW.tar 17.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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