NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE50874 Query DataSets for GSE50874
Status Public on Sep 14, 2013
Title Methylation Profiling of Human Kidney Tubules
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary We sought to decrease the cell type heterogeneity of kidney tissues to increase the resolution of methylation profiles. To that end, microdissected human kidney tissue from patients are used and hybridized on Illumina HumanMethylation450 BeadChip arrays.
 
Overall design We extract genomic DNA from microdissected human kidney tubule samples. And used these genomic DNA for the Illumina 450K beads array.
 
Contributor(s) Ko Y, Han SY, Park AD, Susztak K
Citation(s) 24098934, 28556588
Submission date Sep 13, 2013
Last update date Aug 01, 2019
Contact name Yi-An Ko
E-mail(s) yian.kia.ko@gmail.com
Organization name UPeenn
Department Genetics & Gene Regulation
Lab Susztak
Street address 415 curie blvd
City Philadelphia
State/province Pennsylvania
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (85)
GSM1231468 genomic DNA from microdissected human kidney1
GSM1231469 genomic DNA from microdissected human kidney2
GSM1231470 genomic DNA from microdissected human kidney3
Relations
BioProject PRJNA219206

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE50874_AveBeta_pvalue_signalAB.txt.gz 469.5 Mb (ftp)(http) TXT
GSE50874_RAW.tar 183.1 Mb (http)(custom) TAR
Processed data included within Sample table
Processed data are available on Series record
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap