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| Status |
Public on Feb 15, 2016 |
| Title |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
| Organisms |
Danio rerio; Mus musculus |
| Experiment type |
Expression profiling by array
Non-coding RNA profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
26857418 |
| Submission date |
Sep 19, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Mark Ibberson |
| Organization name |
SIB Swiss Institute of Bioinformatics
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| Department |
Vital-IT
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| Street address |
Genopode building
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| City |
Lausanne |
| ZIP/Postal code |
CH-1015 |
| Country |
Switzerland |
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| Platforms (4)
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| GPL1319 |
[Zebrafish] Affymetrix Zebrafish Genome Array |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
| GPL9319 |
Illumina Genome Analyzer II (Danio rerio) |
| GPL10740 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] |
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| Samples (34)
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| GSM1234838 |
Heart, Sham, rep4 |
| GSM1234839 |
Heart, Sham, rep5 |
| GSM1234840 |
Heart, Sham, rep6 |
| GSM1234841 |
Heart, Infarcted, rep1 |
| GSM1234842 |
Heart, Infarcted, rep2 |
| GSM1234843 |
Heart, Infarcted, rep3 |
| GSM1234844 |
Heart, Infarcted, rep4 |
| GSM1234845 |
Heart, Infarcted, rep5 |
| GSM1234846 |
Heart, Infarcted, rep6 |
| GSM1234847 |
Heart, Control, rep1 |
| GSM1234848 |
Heart, Control, rep2 |
| GSM1234849 |
Heart, Control, rep3 |
| GSM1234850 |
Heart, Control, rep4 |
| GSM1234851 |
Heart, Resected, rep1 |
| GSM1234852 |
Heart, Resected, rep2 |
| GSM1234853 |
Heart, Resected, rep3 |
| GSM1234854 |
Heart, Resected, rep4 |
| GSM1234956 |
Heart, Resected, rep1 |
| GSM1234957 |
Heart, Resected, rep2 |
| GSM1234958 |
Heart, Resected, rep3 |
| GSM1234959 |
Heart, Resected, rep4 |
| GSM1234960 |
Heart, Control, rep1 |
| GSM1234961 |
Heart, Control, rep2 |
| GSM1234962 |
Heart, Control, rep3 |
| GSM1234963 |
Heart, Control, rep4 |
| GSM1234964 |
Heart, Sham, rep1 |
| GSM1234965 |
Heart, Sham, rep2 |
| GSM1234966 |
Heart, Sham, rep3 |
| GSM1234967 |
Heart, Infarcted, rep1 |
| GSM1234968 |
Heart, Infarcted, rep2 |
| GSM1234969 |
Heart, Infarcted, rep3 |
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| This SuperSeries is composed of the following SubSeries:
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| GSE51012 |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
| GSE51013 |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
| GSE51018 |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
| GSE51019 |
Comparative transcriptome profiling of the injured zebrafish and mouse hearts identifies miRNA-dependent repair pathways |
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| Relations |
| BioProject |
PRJNA219631 |
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