|
| Status |
Public on Jan 01, 2014 |
| Title |
Transcription profiling reveals potential mechanisms of dysbiosis in the oral microbiome of rhesus macaques with chronic untreated SIV infection |
| Organisms |
Macaca mulatta; Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
24312248 |
| Submission date |
Oct 20, 2013 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Michael George |
| E-mail(s) |
mdgeorge@ucdavis.edu
|
| Organization name |
University of California, Davis
|
| Department |
Medical Microbiology and Immunology
|
| Street address |
451 Health Sciences Drive
|
| City |
Davis |
| State/province |
CA |
| ZIP/Postal code |
95616 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
| GPL3535 |
[Rhesus] Affymetrix Rhesus Macaque Genome Array |
|
| Samples (14)
|
| GSM1245692 |
healthy uninfected macaque biological rep 1 |
| GSM1245693 |
healthy uninfected macaque biological rep 2 |
| GSM1245694 |
healthy uninfected macaque biological rep 3 |
| GSM1245695 |
SIV infected macaque biological rep 1 |
| GSM1245696 |
SIV infected macaque biological rep 2 |
| GSM1245697 |
SIV infected macaque biological rep 3 |
| GSM1245698 |
SIV infected macaque biological rep 4 |
| GSM1245699 |
SIV infected macaque biological rep 5 |
| GSM1245801 |
tongue epithelium from healthy uninfected macaque biological rep 1 |
| GSM1245802 |
tongue epithelium from healthy uninfected macaque biological rep 2 |
| GSM1245803 |
tongue epithelium from SIV infected macaque biological rep 1 |
| GSM1245804 |
tongue epithelium from SIV infected macaque biological rep 2 |
| GSM1245805 |
TR146 oral epithelial cell line treated with interferon gamma |
| GSM1245806 |
untreated TR146 oral epithelial cell line |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE51436 |
Expression data from rhesus macaque tongue |
| GSE51438 |
Expression data from rhesus macaque tongue epithelium |
| GSE51439 |
Expression data from human oral epithelial cell line |
|
| Relations |
| BioProject |
PRJNA223205 |
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