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Series GSE5156 Query DataSets for GSE5156
Status Public on Jun 28, 2006
Title Impact of intestinal colonization on Paneth cell gene expression
Organism Mus musculus
Experiment type Expression profiling by array
Summary This study delineated how small intestinal resident microflora impact gene expression in Paneth cells.
Keywords: functional genomics; transcriptional profiling
Overall design Paneth cells were isolated by laser capture microdissection from the small intestines of germ-free and conventionalized (10 day) mice. RNAs from 3 mice per group were pooled, and duplicate RNAs from each group were amplified and hybridized to Affymetrix arrays.
Contributor(s) Cash HL, Whitham CV, Behrendt CL, Hooper LV
Citation(s) 16931762
Submission date Jun 26, 2006
Last update date Feb 11, 2019
Contact name Lora V Hooper
Phone 214-648-7306
Organization name The University of Texas Southwestern Medical Center at Dallas
Department Immunology
Street address 5323 Harry Hines Blvd.
City Dallas
State/province TX
ZIP/Postal code 75390-9093
Country USA
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (4)
GSM116357 Germfree Paneth cell 1
GSM116358 Germfree Paneth cell 2
GSM116359 Conventionalized Paneth cell 1
BioProject PRJNA96567

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE5156_RAW.tar 23.7 Mb (http)(custom) TAR (of CEL, EXP)
Raw data provided as supplementary file

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