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Series GSE51819 Query DataSets for GSE51819
Status Public on Nov 06, 2013
Title Low paternal dietary folate alters the sperm epigenome and is associated with negative pregnancy outcomes
Organism Mus musculus
Experiment type Expression profiling by array
Summary We hypothesized that the availability of folate, a soluble B vitamin, would alter the levels of DNA methylation in spermatogenesis with consequences for the sperm epigenome and pregnancy outcomes. We fed male mice with either a folate-deficient or a folate-sufficient diet throughout life. Males fed the folate-deficient diet had offspring with increased birth defects, which included craniofacial and musculoskeletal malformations. These phenotypes corresponded to developmental genes with altered methylation in sperm. To determine if there was transmission of epigenetic effects from sires to offspring, global gene expression levels were assessed in placenta from 18.5 dpc fetuses sired by either a folate-sufficient or folate-deficient male.
 
Overall design Gene expression was measured in placenta of 18.5 dpc fetuses sired by either a folate sufficient male (n=4 placentas from different litters and different fathers) or a folate deficient (FD) male (n=4 placentas from different litters and different fathers).
 
Contributor(s) Lambrot R, Kimmins S
Citation(s) 24326934
Submission date Oct 28, 2013
Last update date Feb 02, 2018
Contact name Romain Lambrot
E-mail(s) romain.lambrot@mcgill.ca
Phone 5143987663
Organization name McGill University
Department Animal Science
Lab Kimmins Lab
Street address 21111 Lakeshore road
City Ste Anne-de-Bellevue
State/province QC
ZIP/Postal code H9X 3V9
Country Canada
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (8)
GSM1253193 Placenta_Folate sufficient_rep1
GSM1253194 Placenta_Folate sufficient_rep2
GSM1253195 Placenta_Folate sufficient_rep3
Relations
BioProject PRJNA225485

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51819_RAW.tar 25.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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