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Series GSE51908 Query DataSets for GSE51908
Status Public on Oct 31, 2013
Title miRNA expression data from normal and Malignant hematopoietic cells
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary This data was used to identify miRNA signatures that can be used to calssify specific leukemia types including AML, precursor B ALL, precursor T ALL, and normal hematopoietic progenitor and mature populations
This data was used to identify miRNA signatures that can be used to calssify specific leukemia types including AML, precursor B ALL, precursor T ALL, and normal hematopoietic progenitor and mature populations
 
Overall design AML cell lines and patient samples, B ALL cell lines and Patient samplest, T ALL cell lines and patient samples, norma B cells, normal granulocytes, normal monocytes, normal T cells and normal CD34+ cells were used for RNA extraction and hybridization on Affymetrix microarrays. All the AML, B ALL, T ALL cell lines were cultured in vitro under appropriate culture conditons and harvested in their log phase growth for RNA extraction. AML, B ALL, and T ALL patient samples were collected...(I assume these are the PBMCs from eitehr peripheral blood or bone marrow from patients, please confirm). Normal B cells, granulocytes, monocytes, and T cells were purified from human peripheral blood of normal healthy donors.
 
Contributor(s) Civin CI
Citation(s) 25368993, 27274862
Submission date Oct 30, 2013
Last update date Jul 18, 2019
Contact name Amol Carl Shetty
E-mail(s) ashetty@som.umaryland.edu
Organization name University of Maryland Baltimore
Department Institute for Genome Sciences
Street address 670 W. Baltimore Street, Floor 3
City Baltimore
State/province Maryland
ZIP/Postal code 21201
Country USA
 
Platforms (1)
GPL8786 [miRNA-1] Affymetrix Multispecies miRNA-1 Array
Samples (190)
GSM1254936 K562-1
GSM1254937 K562-2
GSM1254938 K562-3
Relations
BioProject PRJNA225798

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51908_RAW.tar 28.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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