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Series GSE52104 Query DataSets for GSE52104
Status Public on Dec 01, 2013
Title Gene expression profiles of stromal cells in ovarian cancer co-culture models
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Goal: to profile gene expression change that occur when cancer-associated firboblast precursor cells are co-cultured with normal epithelial cells (IOSE4) or epithelial ovarian cancer cells (HeyA8)
 
Overall design MSCs and INOF cells were co-cultured with IOSE4 cells or Hey.A8 EOC cells. 1000 stromal cells were plated into 6 well plates and 10,000 epithelial cells plated into porous inserts (pore size 1μm, Greiner BioOne). After 24hrs, cells were refed and epithelial cell inserts added to the stromal cell cultures. Cells were grown in 50% INOF medium and 50% MSC medium for 7 days before harvesting RNA
 
Contributor(s) Lawrenson K, Gayther SA, Millstein J
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Submission date Nov 05, 2013
Last update date Aug 16, 2018
Contact name Kate Lawrenson
E-mail(s) kate.lawrenson@med.usc.edu
Organization name University of Southern California
Department Preventive Medicine
Street address 1450 Biggy Street
City Los Angeles
State/province CA
ZIP/Postal code 90026
Country USA
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (18)
GSM1259403 6303221029_G
GSM1259404 6303221029_H
GSM1259405 6303221029_I
Relations
BioProject PRJNA226693

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52104_RAW.tar 6.2 Mb (http)(custom) TAR
GSE52104_non-normalized.txt.gz 6.3 Mb (ftp)(http) TXT
GSE52104_normalized_matrix.txt.gz 3.8 Mb (ftp)(http) TXT
Processed data are available on Series record

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