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Series GSE52708 Query DataSets for GSE52708
Status Public on Nov 25, 2013
Title The mechanism of elevated S100A6 (Calcyclin) Enhances Tumorigenesis in clear cell renal cell carcinoma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Among all types of urological cancers, the clear cell renal cell carcinoma is the second leading cause of death in adults. This is mainly due to lack of promising prognosis or predictors, and effective target therapy. S100A6 (calcyclin), a member of S100 family of proteins, is reported to be elevated in many types of cancers. In the present study, we analyzed the expression of S100A6 in mRNA, in proteins and tissues. The mechanism of enhancing tumorigenesis was studied to understand the role of S100A6 in clear cell renal cell carcinoma tumorigenesis. Microarray and bioinformatic analyses were performed in the stable transfection of overexpression and knockdown of S100A6, comparing with each empty vector control in order to find the different expression genes and explore the mechanism.
The microarray analysis of clear cell renal cell carcinoma 786-O cell line treated with overexpression and knockdown S100A6.
 
Overall design Four samples: overexpression S100A6 sample and vector control sample, knockdown S100A6 and vector control sample, each sample had three replicates.
 
Contributor(s) Lyu X
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Submission date Nov 25, 2013
Last update date Apr 23, 2018
Contact name xu zhang
Organization name PLA general hospital
Street address Fuxing road
City Beijing
ZIP/Postal code 100853
Country China
 
Platforms (1)
GPL17077 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
Samples (12)
GSM1274412 786-O_overexpression 1_rep3
GSM1274413 786-O_overexpression 2_rep3
GSM1274414 786-O_overexpression 3_rep3
Relations
BioProject PRJNA229870

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52708_RAW.tar 148.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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