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Series GSE53227 Query DataSets for GSE53227
Status Public on Dec 12, 2013
Title Epigenome analysis of human brain gliomas (part 1)
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of 112 human glioma samples. The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in glioma samples, including 55 WHO grade 2 glioma samples, 33 WHO grade 3 glioma samples and 24 WHO grade 4 glioma samples.
 
Overall design Bisulphite converted DNA from the 112 glioma samples were hybridised to the Illumina Infinium 27k Human Methylation Beadchip v1.2
 
Contributor(s) Jiang T, Wang Z
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 11, 2013
Last update date Jan 02, 2015
Contact name Tao Jiang
Organization name Beijing Tiantan Hospital, Capital Medical University
Department Neurosurgery
Street address Tiantan Xili No.6, Dongcheng District
City Beijing
ZIP/Postal code 100050
Country China
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (112)
GSM1287993 Astrocytoma a-0253
GSM1287994 Astrocytoma a-0258
GSM1287995 Astrocytoma a-0281
This SubSeries is part of SuperSeries:
GSE53229 Epigenome analysis of human brain gliomas
Relations
BioProject PRJNA231172

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53227_RAW.tar 5.8 Mb (http)(custom) TAR
GSE53227_signal_intensities.txt.gz 17.9 Mb (ftp)(http) TXT
Processed data included within Sample table
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