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Series GSE53662 Query DataSets for GSE53662
Status Public on Nov 15, 2014
Title Expression analysis of blastocysts in Kdm4b-PEs
Organism Mus musculus
Experiment type Expression profiling by array
Summary To identify the genes that are controled by H3K9me3 modification in PEs, we conducted transcriptome analysis using Egfp-, Kdm4b-PEs, and IVF embryos at blastocyst stages.
 
Overall design Kdm4b or Egfp mRNA injected oocytes were parthenogenetically activated. IVF embryos were generated according to standard protcol. All embryos were cultured in KSOM medium for 120 hours after activation or sperm insemination. Five blastocysts per one biological replicate were pooled and analyzed.
 
Contributor(s) Fukuda A
Citation(s) 25394724
Submission date Dec 26, 2013
Last update date Feb 02, 2018
Contact name Atsushi Fukuda
E-mail(s) fukuda-at@ncchd.go.jp
Organization name National Center for Child Health and Development
Department Reproductive biology
Street address 2-10-1 Okura
City Setagaya-ku
State/province Tokyo
ZIP/Postal code 157-8535
Country Japan
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (8)
GSM1298189 Kdm4b-PEs-1
GSM1298190 Kdm4b-PEs-2
GSM1298191 Kdm4b-PEs-3
Relations
BioProject PRJNA233656

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53662_RAW.tar 95.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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