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Series GSE53698 Query DataSets for GSE53698
Status Public on Feb 17, 2016
Title RNAseq in IMR-32 neuroblastoma cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary IMR-32 cells were subjected to lentiviral YRNA infection or nELAVL RNAi and/or UV stress followed by RNAseq analysis to monitor RNA level changes
 
Overall design RNA from IMR-32 cells was Trizol extracted, Ribominus selected and submitted for high-throughput sequencing.
 
Contributor(s) Scheckel C, Drapeau E, Buxbaum JD, Darnell RB
Citation(s) 26894958
Submission date Dec 29, 2013
Last update date May 15, 2019
Contact name Claudia Scheckel
E-mail(s) claudia.scheckel@gmail.com
Organization name University Hospital Zurich
Department Institute of Neuropathology
Street address Schmelzbergstrasse 12
City Zurich
State/province NY
ZIP/Postal code 8091
Country Switzerland
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (21)
GSM1885097 RNAseq_IMR-32_mock_noUV_1
GSM1885098 RNAseq_IMR-32_mock_noUV_2
GSM1885099 RNAseq_IMR-32_mock_noUV_3
This SubSeries is part of SuperSeries:
GSE53699 nELAVL HITS-CLIP and RNA-seq in Alzheimer's Disease patients and IMR-32 neuroblastoma cells
Relations
BioProject PRJNA232668
SRA SRP034832

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53698_RNAseq_IMR-32.txt.gz 2.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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