NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE53738 Query DataSets for GSE53738
Status Public on Jan 31, 2014
Title Identification of biomarkers for Miltefosine resistance in Leishmania donovani
Organism Leishmania donovani
Experiment type Expression profiling by array
Summary To identify biomarkers specific for Miltefosin resistant parasites, we used DNA microarray to identify differentially expressed genes in resistant parasite in comparision to sensitive and further validated with real time PCR assay and immunoblotting assay
 
Overall design Clinically proven miltefosine reistant as well as respondant parasite strains isolated from splenic aspirates and grown in M199 media. For microarray resistant and sensitive samples run in duplicate while for real time PCR, 25 resistant and 33 sensitive strains used. For immunoblotting, confirmed genes were cloned and recombinant protein blotted against miltefosine failure and treated patients sera.
 
Contributor(s) Tiwary P, Kumar D, Rai M, Sundar S
Citation(s) 29280431
Submission date Dec 31, 2013
Last update date May 22, 2019
Contact name PUJA TIWARY
E-mail(s) tiwarypuja@gmail.com
Phone 919452071217
Organization name Banaras Hindu University
Department MEDICINE
Lab INFECTIOUS DISEASE RESEARCH LABORATORY
Street address C/O Prof. Shyam Sundar, Dept of Medicine
City Varanasi
State/province India
ZIP/Postal code 221005
Country India
 
Platforms (1)
GPL18125 Leishmania donovani Gene Expression 8x15k Microarray - Genotypic Technology Private Limited (AMADID: 035638) (condensed)
Samples (4)
GSM1299630 L. donovai culture_sensitive_rep1
GSM1299631 L. donovai culture_sensitive_rep2
GSM1299632 L. donovai culture_resistant_rep1
Relations
BioProject PRJNA232750

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53738_raw_signal_intensities.txt.gz 149.3 Kb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap