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| Status |
Public on Jan 07, 2014 |
| Title |
Whole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by array
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
24472155 |
| Submission date |
Jan 07, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
James R Perkins |
| E-mail(s) |
jimrperkins@gmail.com
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| Organization name |
Hospital Carlos Haya
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| Department |
Hospital Civil
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| Lab |
Research Laboratory for Allergic Diseases
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| Street address |
Pl. Hosp. Civil
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| City |
Malaga |
| ZIP/Postal code |
29009 |
| Country |
Spain |
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| Platforms (3) |
| GPL6194 |
[RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [probe set (exon) version] |
| GPL6543 |
[RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [transcript (gene) version] |
| GPL10669 |
Illumina Genome Analyzer IIx (Rattus norvegicus) |
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| Samples (30)
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| GSM1300232 |
SNT 1, 50M |
| GSM1300233 |
SNT 2, 50M |
| GSM1300234 |
SNT 3, 50M |
| GSM1300235 |
Naïve 1, 25M |
| GSM1300236 |
Naïve 2, 25M |
| GSM1300237 |
Naïve 3, 25M |
| GSM1300238 |
SNT 1, 25M |
| GSM1300239 |
SNT 2, 25M |
| GSM1300240 |
SNT 3, 25M |
| GSM1300241 |
Naïve 1, 17M |
| GSM1300242 |
Naïve 2, 17M |
| GSM1300243 |
Naïve 3, 17M |
| GSM1300244 |
SNT 1, 17M |
| GSM1300245 |
SNT 2, 17M |
| GSM1300246 |
SNT 3, 17M |
| GSM1300259 |
Naïve 1 (transcript-level) |
| GSM1300260 |
Naïve 2 (transcript-level) |
| GSM1300261 |
Naïve 3 (transcript-level) |
| GSM1300262 |
SNT 1 (transcript-level) |
| GSM1300263 |
SNT 2 (transcript-level) |
| GSM1300264 |
SNT 3 (transcript-level) |
| GSM1302231 |
Naïve 1 (exon-level) |
| GSM1302232 |
Naïve 2 (exon-level) |
| GSM1302233 |
Naïve 3 (exon-level) |
| GSM1302234 |
SNT 1 (exon-level) |
| GSM1302235 |
SNT 2 (exon-level) |
| GSM1302236 |
SNT 3 (exon-level) |
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| This SuperSeries is composed of the following SubSeries: |
| GSE53762 |
Whole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths (RNA-Seq) |
| GSE53764 |
Whole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths (Affymetrix transcript-level) |
| GSE53860 |
Whole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths (Affymetrix exon-level) |
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| Relations |
| BioProject |
PRJNA233582 |
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