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Series GSE54075 Query DataSets for GSE54075
Status Public on Jun 02, 2014
Title PADI4 acts as a coactivator of Tal1 by counteracting repressive histone arginine methylation at the IL6ST (gp130) promoter
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of common genes regulated by Tal1 and PADI4
 
Overall design 2 controls + 2x3 knockdown samples
HEL cells were transduced with lentiviruses harboring shconstructs against the transcription factor Tal1 and PADI4 respectively, in biological triplicates. Two control samples with a control lentivirus with an shRNA against LacZ were included. RNA was prepared 6 days after transduction.
 
Contributor(s) Lausen J, Kolodziej S, Salinas-Riester G, Opitz L, Pommerenke C
Citation(s) 24874575
Submission date Jan 14, 2014
Last update date Jan 09, 2018
Contact name Gabriela Salinas
E-mail(s) Gabriela.Salinas-Riester@medizin.uni-goettingen.de
Organization name Universitaetsmedizin Goettingen
Department Department of Human Genetics
Lab NGS Integrative Genomics
Street address Justus-von-Liebig-Weg 11
City Goettingen
State/province Lower-Saxony
ZIP/Postal code 37077
Country Germany
 
Platforms (1)
GPL13497 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
Samples (8)
GSM1306822 C_1
GSM1306823 C_2
GSM1306824 PAD4_1
Relations
BioProject PRJNA234539

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54075_RAW.tar 17.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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