|
| Status |
Public on Jan 18, 2014 |
| Title |
Discovery of consensus gene signature and intermodular connectivity defining self-renewal of human embryonic stem cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Comparison of gene expression signatures in undifferentiated hESCs against differentiated embryoid bodies to identify key signatures defining self-renewal of hESCs.
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| |
|
| Overall design |
Using H1 and H9 hESC lines, we performed gene expression microarray analysis (Affymetrix Human Genome U133 Plus 2.0 Array) and analyzed the interaction patterns of 54,614 genes using WGCNA in R programming
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| |
|
| Contributor(s) |
Kim JJ, Khalid O, Namazi A, Tu TG, Elie O, Lee C, Kim Y |
| Citation(s) |
24519983 |
| Submission date |
Jan 17, 2014 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Yong Kim |
| E-mail(s) |
thadyk@ucla.edu
|
| Organization name |
UCLA
|
| Street address |
10833 Le Conte Ave, 73-022 CHS
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90095 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
|
| Samples (8)
|
| GSM1309417 |
undifferentiated H1 hESC biological rep 1 |
| GSM1309418 |
undifferentiated H1 hESC biological rep 2 |
| GSM1309419 |
differentiated H1 hESC biological rep 1 |
| GSM1309420 |
differentiated H1 hESC biological rep 2 |
| GSM1309421 |
undifferentiated H9 hESC biological rep 1 |
| GSM1309422 |
undifferentiated H9 hESC biological rep 2 |
| GSM1309423 |
differentiated H9 hESC biological rep 1 |
| GSM1309424 |
differentiated H9 hESC biological rep 2 |
|
| Relations |
| BioProject |
PRJNA235386 |
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