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Series GSE54341 Query DataSets for GSE54341
Status Public on Mar 31, 2014
Title Expression analysis of OSK and Sall4+OSK reprogramming cells sorted for expression of miR-290 and/or miR-302.
Organism Mus musculus
Experiment type Expression profiling by array
Summary MEFs were infected with Oct4, Sox2, Klf4 (+/- Sall4), sorted for miR-290/302 reporter expression at day 9 (OSK) or 12 (Sall4+OSK), and then profiled. Resulting iPSCs were also profiled. Mouse ES cells were differentiated and sorted for miR-290/302 reporter expression during Fgf/Activin differentiation (day 4 or day 7).
Overall design Performed in biological triplicate. Biological triplicate samples represent three independent lines. Total RNA collected with Trizol. All processing conducted at the UCLA Neuroscience Genomics Core. MouseRef-8 v2.0 Expression BeadChips.
Contributor(s) Parchem R, Blelloch R
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Submission date Jan 23, 2014
Last update date Jun 14, 2018
Contact name Ron Parchem
Organization name UCSF
Street address 35 Medical Center Way
City San Francisco
ZIP/Postal code 94143
Country USA
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (48)
GSM1313461 OSK-black-1
GSM1313462 OSK-black-2
GSM1313463 OSK-black-3
BioProject PRJNA236236

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54341_RAW.tar 3.1 Mb (http)(custom) TAR
GSE54341_non-normalized.txt.gz 7.3 Mb (ftp)(http) TXT
Raw data are available on Series record
Processed data included within Sample table

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