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Series GSE54341 Query DataSets for GSE54341
Status Public on Mar 31, 2014
Title Expression analysis of OSK and Sall4+OSK reprogramming cells sorted for expression of miR-290 and/or miR-302.
Organism Mus musculus
Experiment type Expression profiling by array
Summary MEFs were infected with Oct4, Sox2, Klf4 (+/- Sall4), sorted for miR-290/302 reporter expression at day 9 (OSK) or 12 (Sall4+OSK), and then profiled. Resulting iPSCs were also profiled. Mouse ES cells were differentiated and sorted for miR-290/302 reporter expression during Fgf/Activin differentiation (day 4 or day 7).
 
Overall design Performed in biological triplicate. Biological triplicate samples represent three independent lines. Total RNA collected with Trizol. All processing conducted at the UCLA Neuroscience Genomics Core. MouseRef-8 v2.0 Expression BeadChips.
 
Contributor(s) Parchem R, Blelloch R
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 23, 2014
Last update date Jun 14, 2018
Contact name Ron Parchem
Organization name UCSF
Street address 35 Medical Center Way
City San Francisco
ZIP/Postal code 94143
Country USA
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (48)
GSM1313461 OSK-black-1
GSM1313462 OSK-black-2
GSM1313463 OSK-black-3
Relations
BioProject PRJNA236236

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54341_RAW.tar 3.1 Mb (http)(custom) TAR
GSE54341_non-normalized.txt.gz 7.3 Mb (ftp)(http) TXT
Raw data are available on Series record
Processed data included within Sample table

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