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Series GSE54529 Query DataSets for GSE54529
Status Public on May 14, 2014
Title ChIP-seq mapping of Drosophila TFIIIC (dTFIIIC220; CG7099) and SMC containing complexes in Kc167 cells
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We map the genome-wide binding profiles for dTFIIIC220, as well as the Drosophila cohesin and condensin complexes in the late-stage embryonic cell line Kc167
 
Overall design Examination of several proteins in the Kc167 cell line
 
Contributor(s) Van Bortle K, Takenaka N, Corces V
Citation(s) 24981874
Submission date Jan 29, 2014
Last update date May 15, 2019
Contact name Kevin Van Bortle
Organization name Stanford University
Department Genetics
Lab Michael Snyder
Street address 3165 Porter Dr
City Palo Alto
State/province CA
ZIP/Postal code 94043
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (16)
GSM1318349 dTFIIIC220 biological replicate 1
GSM1318350 dTFIIIC220 biological replicate 2
GSM1318351 dTFIIIC220 biological replicate 3
Relations
BioProject PRJNA237002
SRA SRP036067

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54529_RAW.tar 518.1 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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