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| Status |
Public on Feb 04, 2014 |
| Title |
Illumina Infinium HumanMethylation450 data for human whole blood samples and for mixtures of purified white blood cells reconstructing human blood |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by array
|
| Summary |
The objective of the study was to utilize DNA methylation to quantify human leukocyte subsets in human blood. This file contains data from an Illumina Infinium HumanMethlation450 for human whole blood samples as well as complex mixtures of DNA from purified human leukocyte subtypes in quantities that mimick human blood under different clinical conditions.
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| |
|
| Overall design |
Bisulfite converted DNA from the samples were hybridized to an Illumina Infinium HumanMethylation450 beadchip
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| |
|
| Contributor(s) |
Accomando WP, Wiencke JK, Kelsey KT |
| Citation(s) |
24598480 |
| Submission date |
Feb 04, 2014 |
| Last update date |
Mar 22, 2019 |
| Contact name |
William P Accomando |
| Organization name |
Harvard School of Public Health
|
| Department |
Epidemiology
|
| Street address |
Kresge Bldg 911, 677 Huntington Ave
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (12)
|
| GSM1321546 |
genomic DNA from Normal Reconstruction mixture Reconstruction mixture |
| GSM1321547 |
genomic DNA from Heparin, Fresh Human whole blood 3021 |
| GSM1321548 |
genomic DNA from Severe T-cell Lymphopenia Reconstruction mixture |
| GSM1321549 |
genomic DNA from Heparin, Fresh Human whole blood 3045 |
| GSM1321550 |
genomic DNA from Granulocytopenia Reconstruction mixture |
| GSM1321551 |
genomic DNA from Heparin, Fresh Human whole blood 3082 |
| GSM1321552 |
genomic DNA from Granulocytosis Reconstruction mixture |
| GSM1321553 |
genomic DNA from Heparin, Fresh Human whole blood 3093 |
| GSM1321554 |
genomic DNA from B-cell Lymphopenia Reconstruction mixture |
| GSM1321555 |
genomic DNA from Heparin, Fresh Human whole blood 3159 |
| GSM1321556 |
genomic DNA from Monocytosis Reconstruction mixture |
| GSM1321557 |
genomic DNA from Heparin, Fresh Human whole blood 3177 |
|
| This SubSeries is part of SuperSeries: |
| GSE54671 |
Quantitative reconstruction of leukocyte subsets using DNA methylation |
|
| Relations |
| BioProject |
PRJNA237322 |
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