NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE55034 Query DataSets for GSE55034
Status Public on Feb 15, 2014
Title DNA methylation and gene expression analysis during myogenic differentiation
Organism Homo sapiens
Experiment type Expression profiling by array
Summary DNA methylation has been considered to play an important role during myogenic differentiation. In terminal differentiation of myoblasts, chronological alteration of DNA methylation status was poorly understood. Using Infinium HumanMethylation450 BeadChips, we validated genome wide DNA methylation profiles of human myoblast differentiation models. To investigate correlation between DNA methylation and gene expression, we also assessed gene expression of myoblasts with GeneChip Human Genome U133 Plus 2.0 array.
 
Overall design Gene expression profiles of myoblasts (4 samples) were generated with GeneChip Human Genome U133 Plus 2.0 array (Affymetrix).
This submission represents transcriptome component of study.
 
Contributor(s) Miyata K, Miyata T, Nakabayashi K, Asahara H
Citation(s) 25190712
Submission date Feb 14, 2014
Last update date Mar 25, 2019
Contact name Kohei Miyata
E-mail(s) md100029@cis.fukuoka-u.ac.jp
Phone +81928011011
Organization name Fukuoka University
Department Obstetrics and Gynecology
Street address 7-45-1 Nanakuma, Jounannku
City Fukuoka-city
State/province Fukuoka
ZIP/Postal code 8140131
Country Japan
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (4)
GSM1328177 Gene expression of myoblasts before myogenic stimuli
GSM1328178 Gene expression of myoblasts 3 days after myogenic stimuli
GSM1328179 Gene expression of myoblasts 8 days after myogenic stimuli
Relations
BioProject PRJNA238300

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55034_RAW.tar 18.5 Mb (http)(custom) TAR (of CEL, CHP)
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap