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Series GSE5509 Query DataSets for GSE5509
Status Public on Aug 12, 2006
Title Expression data from Rat liver 48 hours after treated with different toxic compounds.
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Rat has been treated with different compounds with the purpose of investigating toxicological mechanisms. But toxic and non-toxic compounds has been administered. 3 toxic (ANIT, DMN, NMF) 3 non-tox (Caerulein, dinitrophenol(DNP), Rosiglitazone) in 5-plicates (30 arrays in all) and 9 untreated (control), 39 samples in all.
The array data was used to identify genes with biomarker potential for detecting toxic properties of compounds.
Keywords: other
 
Overall design Rats was treated with different compounds and RNA from liver was extracyed after 48 hours. Microarrays (GeneChip Rat230 version 2) was run on the RNA
 
Contributor(s) Spicker JS
Citation(s) 18178960
Submission date Aug 11, 2006
Last update date Jul 31, 2017
Contact name Jeppe Skytte Spicker
E-mail(s) skytte@cbs.dtu.dk
Organization name Danish University of Technology
Department CBS
Street address Building 208
City Lundtofte
ZIP/Postal code XXXX
Country Denmark
 
Platforms (1)
GPL1355 [Rat230_2] Affymetrix Rat Genome 230 2.0 Array
Samples (39)
GSM127049 Rat liver, treated with ANIT, 125 mg/kg in corn oil per orally, extrated 48 hours after treatment, biological rep1
GSM127050 Rat liver, treated with ANIT, 125 mg/kg in corn oil per orally, extrated 48 hours after treatment, biological rep2
GSM127051 Rat liver, treated with ANIT, 125 mg/kg in corn oil per orally, extrated 48 hours after treatment, biological rep3
Relations
BioProject PRJNA96069

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE5509_RAW.tar 162.1 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file

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