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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 12, 2014 |
| Title |
Snd1-Mtdh interaction regulates cell survival under camptothecin-induced replication stress |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
PyMT tumor cells with indicated status of Mtdh and Snd1 were treated with camptothecin (CPT) and the transcirptome profiles were determined and compared
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| Overall design |
two sets of experiments: (1) vector control vs Snd1-KD under CPT treament (2) PyMT/Mtdh-KO cells reconstituted with either WT or Snd1-binding deficient mutant Mtdh (W391D) under CPT treatment
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| Contributor(s) |
Liling W, Yong W |
| Citation(s) |
24981741 |
| Submission date |
Mar 03, 2014 |
| Last update date |
Feb 29, 2024 |
| Contact name |
Yong Wei |
| E-mail(s) |
yongwei@princeton.edu
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| Organization name |
Princeton University
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| Department |
Molecular Biology
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| Lab |
Kang
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| Street address |
LTL227 Wathington Road
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| City |
Plainsboro |
| State/province |
NJ |
| ZIP/Postal code |
08536 |
| Country |
USA |
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| Platforms (1) |
| GPL7202 |
Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) |
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| Samples (8)
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| GSM1338620 |
WTA PyMT tumor cells with Snd1 shRNA KD, treated with CPT, replicate 2 |
| GSM1338621 |
WTA PyMT tumor cells with Snd1 shRNA KD, treated with CPT, replicate 3 |
| GSM1338622 |
WTA PyMT tumor cells infected with empty vector, treated with CPT, replicate 1 |
| GSM1338623 |
WTA PyMT tumor cells infected with empty vector, treated with CPT, replicate 2 |
| GSM1338624 |
WTA PyMT tumor cells infected with empty vector, treated with CPT, replicate 3 |
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| Relations |
| BioProject |
PRJNA239832 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE55522_RAW.tar |
35.5 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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