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Series GSE55966 Query DataSets for GSE55966
Status Public on Mar 18, 2014
Title Gene expression of early craniofacial development through RNA-seq
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report gene expression patterns in embryonic mice (E8.5, E9.5, E10.5) through RNA-seq of 13 tissue/stage combinations in order to generage an atlas of early mouse craniofacial gene expression.
 
Overall design Embryos at E8.5, E9.5, and E10.5 CD1 were collected from CD1 mice, fom multiple micro-regions whose development, differentiation and signaling are responsible for the construction of the mammalian face.
 
Contributor(s) Potter S, Aronow B, Karns R
Citation(s) 24780627
Submission date Mar 17, 2014
Last update date May 15, 2019
Contact name Rebekah Karns
E-mail(s) Rebekah.Karns@cchmc.org
Organization name Cincinnati Children's Hospital Medical Center
Department Gastroenterology, Hepatology, & Nutrition
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45276
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (16)
GSM1349562 E8.5 mesoderm
GSM1349563 E8.5 caudal brain neural epithelium
GSM1349564 E8.5 floor plate
This SubSeries is part of SuperSeries:
GSE55967 A superseries of gene expression in early craniofacial development in mouse embryos at stages E8.5, E9,5, and E10.5.
Relations
BioProject PRJNA241446
SRA SRP040252

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55966_RAW.tar 2.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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