|
| Status |
Public on Apr 01, 2014 |
| Title |
Transcriptional landscape of Rag2 -/- thymocytes |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Non-coding RNA profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
26673693, 25732733 |
| Submission date |
Apr 01, 2014 |
| Last update date |
Apr 06, 2021 |
| Contact name |
Pierre Daniel Cauchy |
| E-mail(s) |
cauchy@ie-freiburg.mpg.de
|
| Phone |
+49 (0)761 270-77576
|
| Organization name |
University Medical Center Freiburg
|
| Department |
Zentrum für Translationale Zellforschung
|
| Lab |
AG Onco-Immunology
|
| Street address |
Breisacher Str. 115
|
| City |
Freiburg |
| State/province |
Baden-Württemberg |
| ZIP/Postal code |
79106 |
| Country |
Germany |
| |
|
| Platforms (5)
|
| GPL6246 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
| GPL14602 |
AB SOLiD 4 System (Mus musculus) |
| GPL15907 |
AB 5500xl Genetic Analyzer (Mus musculus) |
|
| Samples (26)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE56357 |
Gene expression analysis of CD4+ CD8+ thymocytes [Affymetrix] |
| GSE56358 |
Transcriptional landscape of Rag2 -/- thymocytes [ShortRNA-Seq] |
| GSE56360 |
Transcriptional landscape of Rag2 -/- thymocytes [Mnase-Seq] |
| GSE56393 |
Transcriptional landscape of Rag2 -/- thymocytes [ChIP-Seq] |
|
| Relations |
| BioProject |
PRJNA243126 |
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