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Series GSE56406 Query DataSets for GSE56406
Status Public on Mar 23, 2015
Title Global gene expression analyses of paused iPSCs
Organism Mus musculus
Experiment type Expression profiling by array
Summary Low Klf4 expression reproducibly gives rise to a homogeneous population of partially reprogrammed iPSCs. Upregulation of Klf4 allows these cells to resume reprogramming, indicating that they are paused iPSCs that remain on the path towards pluripotency. Paused iPSCs with different Klf4 expression levels remain at distinct intermediate stages of reprogramming.
 
Overall design Total RNAs were isolated from paused iPSCs cultured with 0, 10, 30 or 100 nM of Shield1 22 days after vector infection.
 
Contributor(s) Nishimura K, Hisatake K
Citation(s) 25418733
Submission date Apr 01, 2014
Last update date Jun 14, 2018
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (24)
GSM1360930 MEF_1
GSM1360931 MEF_2
GSM1360932 MEF+KOSM_4d_1
Relations
BioProject PRJNA243246

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE56406_Non-normalized_data.txt.gz 4.3 Mb (ftp)(http) TXT
GSE56406_RAW.tar 3.1 Mb (http)(custom) TAR
Raw data are available on Series record
Processed data included within Sample table

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