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Series GSE57774 Query DataSets for GSE57774
Status Public on Sep 23, 2014
Title Small molecules facilitate rapid and synchronous iPSC generation
Organism Mus musculus
Experiment type Expression profiling by array
Summary The reprogramming of somatic cells into induced pluripotent stem cells (iPSCs) upon overexpression of OCT4, KLF4, SOX2 and c-MYC (OKSM) provides a powerful system to interrogate basic mechanisms of cell fate change. However, iPSC formation with standard methods is typically protracted and inefficient, resulting in heterogeneous cell populations. We show that exposure of OKSM-expressing cells to both ascorbic acid and a GSK3-β inhibitor (AGi) facilitates more synchronous and rapid iPSC formation from several mouse cell types. AGi treatment restored the ability of refractory cell populations to yield iPSC colonies, and it attenuated the activation of developmental regulators commonly observed during the reprogramming process. Moreover, AGi supplementation gave rise to chimera-competent iPSCs after as little as 48 h of OKSM expression. Our results offer a simple modification to the reprogramming protocol, facilitating iPSC induction at unparalleled efficiencies and enabling dissection of the underlying mechanisms in more homogeneous cell populations.
 
Overall design 18 samples were analyzed in total, samples represent bulk cultures of reprogrammable-MEFs (Rep-MEFs) that express OKSM and were supplemented with ascorbic acid and GSK3i during iPS cell induction. Control samples represent similar bulk cultures of reprogrammable-MEFs that express OKSM but were not supplemented with ascorbic acid and GSK3i during iPS cell induction.
GMP-iPSCs were generated using 48 hours of OKSM+AGi induction. Fibroblast-iPSCs were generated using 96 hours of OKSM+AGi induction.
 
Contributor(s) Bar-Nur O, Brumbaugh J, Hochedlinger K
Citation(s) 25262205
Submission date May 19, 2014
Last update date Feb 21, 2018
Contact name Ori Bar-Nur
E-mail(s) ori.bar-nur@mail.huji.ac.il
Organization name Harvard University
Department Center of Regenerative medicine
Lab Hochedlinger
Street address 185 Cambridge st.
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (18)
GSM1388377 WT ESCs
GSM1388378 Fibroblasts-iPS, biological rep1
GSM1388379 GMP-iPS, biological rep1
Relations
BioProject PRJNA248071

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE57774_RAW.tar 176.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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