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Series GSE58099 Query DataSets for GSE58099
Status Public on May 29, 2015
Title RING1B O-GlcNAcylation regulates gene targeting of Polycomb Repressive Complex 1 in human embryonic stem cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report the DNA binding profile of RING1B (ChIP_HA) and O-GlcNAcylated RING1B (re-ChIP_WGA) in human embryonic stem cells (hESC).
 
Overall design HA-RING1B was recombinantly expressed in hESC. DNA bound by HA-RING1B was enriched through HA-ChIP. DNA bound by O-GlcNAcylated HA-RING1B was enriched thourgh WGA-ChIP.
 
Contributor(s) Maury JJ, EL Farran CA, Loh Y, Choo AB
Citation(s) 26100231
Submission date May 29, 2014
Last update date May 15, 2019
Contact name Chadi El Farran
Organization name Institute of Molecular and Cell Biology
Lab Epigenetics and Cell Fates Laboratory
Street address 61 Biopolis Drive
City Singapore
ZIP/Postal code 138673
Country Singapore
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (3)
GSM1400761 ChIP_HA
GSM1400762 Re-ChIP_WGA
GSM1400763 Input
Relations
BioProject PRJNA248896
SRA SRP042376

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58099_RAW.tar 3.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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