NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE58102 Query DataSets for GSE58102
Status Public on May 30, 2014
Title Expression profile of Breast Cancer tumors in Brazilian women
Organism Homo sapiens
Experiment type Expression profiling by array
Summary On the basis of prognostic information provided by the PAM50 predictor, we evaluated how samples grouped relative to the other breast tumor subtypes. mRNA samples from 24 patients were amplified, labeled, and hybridized to the Affymetrix GeneChip Human Exon 1.0 ST array. After normalization and analysis of the microarray data using Partek® software (http://www.partek.com), we clustered all samples using the PAM50 predictor.
 
Overall design We analyzed tumors from 24 patients with breast cancer using the Affymetrix Human Exon 1.0 ST platform. Array data was processed by AffymetrixExpression Console and analysed using Partek software
 
Contributor(s) Binato R, Panis C, Abdelhay E
Citation(s) 34707101
Submission date May 29, 2014
Last update date Nov 03, 2021
Contact name Renata Binato
E-mail(s) renata.binato@inca.gov.br
Phone +55(21)32071874
Organization name INCA
Lab Lab. Célula Tronco
Street address Praça Cruz Vermelha 23/ 6 andar ala C
City Rio de Janeiro
State/province Rio de Janeiro
ZIP/Postal code 20230-130
Country Brazil
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (24)
GSM1400783 P1
GSM1400784 P2
GSM1400785 P3
Relations
BioProject PRJNA248905

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58102_RAW.tar 540.8 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap