NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE58119 Query DataSets for GSE58119
Status Public on Jun 03, 2014
Title DNA methylation profiling of serum DNA samples of the UKCTOCS cohort
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in serum DNA samples from a total of 282 healthy postmenopausal women of which 134 developed breast cancer within a 5-year follow-up period
 
Overall design Bisulphite converted DNA from the serum were hybridised to the Illumina Infinium 27k Human Methylation Beadchip v1.2
 
Contributor(s) Teschendorff A, Widschwendter M
Citation(s) 25067956
Submission date May 30, 2014
Last update date May 02, 2016
Contact name Andrew E Teschendorff
E-mail(s) a.teschendorff@ucl.ac.uk
Phone +44 02076790727
Organization name University College London
Department UCL Cancer Institute/Institute for Women's Health
Street address 72 Huntley Street
City London
ZIP/Postal code WC1E 6BT
Country United Kingdom
 
Platforms (1)
GPL8490 Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
Samples (282)
GSM1401009 Serum DNA 1
GSM1401010 Serum DNA 2
GSM1401011 Serum DNA 3
Relations
BioProject PRJNA251345

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58119_RAW.tar 133.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap