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Series GSE5838 Query DataSets for GSE5838
Status Public on Mar 12, 2008
Title Expression data from transplanted intestine bifor signs of rejection, and when their was signs of rejection
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Acute cellular rejection (ACR) is the major cause of intestinal graft loss. Little is known about the genetic response occurring in small bowel transplantation (SBTx) during ACR. We report the case of a 44 year-old female with short gut syndrome following multiple surgeries for familial adenomatous polyposis that underwent living-related SBTx. We obtained for the first time a gene expression profile of the intestinal graft during ACR. Microarray analysis revealed increased transcript levels for genes that match identically to an IFN? signature reported for activated plasmacytoid dendritic cells and T-cell chemotaxis and cytolysis correlating with the diagnosis of ACR.
Keywords: disease state analysis
 
Overall design
sam1, sam2, sam3 (without signs of rejection)

sam4, sam5, sam6 (with signs and symptoms of rejection , histology showed increasing lymphocyte infiltration in the lamina propria and epithelium)

 
Contributor(s) Bradley SP, Elias GM, Brown ML, Pahari MP, Bannar B, Rastellini C, Cicalese L
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Submission date Sep 14, 2006
Last update date Mar 25, 2019
Contact name Georg Elias
E-mail(s) georg.elias@umassmed.edu
Phone 508 856 8986
Organization name UMASSMED
Department Surgery/ Transplant
Lab Cell Transplant/ Cicalese
Street address 377 plantation St/ Biotech 4
City worcester
State/province MA
ZIP/Postal code 01605
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (6)
GSM136141 without rejection 5 10-1
GSM136142 without rejection 5 10-2
GSM136143 without rejection 5 10-3
Relations
BioProject PRJNA97233

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary data files not provided

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